back to article Heart of glass: Human genome stored for 'eternity' in 5D memory crystal

Whether or not some future entity will want to bring humanity back after its eventual extinction is now a theoretical if improbable option, thanks to boffins at the University of Southampton in the UK. Researchers led by optoelectronics professor Peter Kazansky have used an ultra-fast laser to inscribe the human genome in a 5D …

  1. JessicaRabbit

    Good luck recreating people without also storing the genome of all the bacteria and viruses that inhabit our bodies and carry out an essential role in keeping us alive and healthy.

    1. Paul Herber Silver badge

      ... and the genome of cats to keep us happy, and under control.

    2. Bebu
      Windows

      Monsters

      Good luck recreating people without also storing the genome of all the bacteria and viruses

      I was thinking that you would also need instructions on the synthesis of the non nucleic acid, mostly peptide, components of cells involved in transcription (DNA->mRNA) and translation (mRNA->peptide) just to bootstrap. Without even contemplating chromosomal structures and mitochondrial DNA.

      I suspect alien lifeforms based on entirely different chemistries given this record without a living example of our nucleic acid/aminoacid biochemistry would be completely flummoxed.

      Personally I would hope this exhibit is labelled NOT Mostly Harmless

      See The Monster* - A. E. van Vogt (1948)

      * aka Resurrection

      1. Muscleguy

        Re: Monsters

        Look up the RNA World Hypothesis, RNA can be both info store & enzyme. It likely came first, the things which break down naked RNA in this world did not exist back then. Experiments which removed all the proteins and the later added RNAs from the ribosome made a ribosome which self assembles and makes protein. It’s slow and buggy but it works and life probably wasn’t that fast back then and buggy can be a feature in exploring morphospace.

        So the sequences of those RNAs along with the RNA Pol III mRNAs should suffice.

      2. LybsterRoy Silver badge

        Re: Monsters

        Having read and enjoyed the story many years ago seeing the extent of the summary on Wikipedia makes me wonder why they didn't just put the whole story on there.

    3. Headley_Grange Silver badge

      I had a related discussion recently in the pub and my friend's wife pointed out that even with ingredients and instructions I can't make a decent Yorkshire pudding! You could analyse a Yorkshire with, say, a mass spectrometer and know all the elements and compounds that it contains, but you'd be a long way from being able to re-create one as good as my mum makes.

    4. Adair Silver badge

      What's the read rate?

      1. levihb

        Doesn't really matter. The genome is only ~720MB and this is archival. Even if you can only read it at 1kB/s that's still only just over a week. So you could read it out with an electron microscope or something if needed.

        1. Adair Silver badge

          I'm not too bothered about the amount of time any alien may need to waste getting hold of this whimsical piece of data.

          I'm more interested in the practicalities for the people most likely to ever actually use it.

    5. Richard Boyce

      Our DNA contains the info for building a human body inside another, so that's likely a showstopper right there.

      1. Jellied Eel Silver badge

        First, build your artificial chicken..

        Our DNA contains the info for building a human body inside another, so that's likely a showstopper right there.

        Aha, but.. The DNA also contains the instructions for building a womb and all the ancillary equipment. Might take a bit of trial and error, or just inserting the reconstructed DNA into a tin of primordial soup and waiting a bit.

    6. Sceptic Tank Silver badge
      Headmaster

      Hmmmmmm ....

      There's also the problem of bootstrapping some brain activity. It's already next to impossible to start up a 40-50 y.o. niche computer found in somebody's basement if you don't have the disks / mag tape / paper tape containing the operating system.

  2. Yet Another Anonymous coward Silver badge

    Unfortunately

    It became unreadable when Windows65536 only supports 6D memory crystal storage

    1. vtcodger Silver badge

      Re: Unfortunately

      I believe this to be incorrect. Although some people do in fact refer to the memory crystal storage capability in Windows65536 and later as "6D", it is actually a Summer Coding Project spin off based on Memory Crystal 4D without the massive MC 5D fixes and additions and with some quite incomprehensible additions of its own. The actual (draft) 6D standard has been stalled in an IETF committee for 13 years.

      1. Yet Another Anonymous coward Silver badge

        Re: Unfortunately

        And MSFT only implemented Memory Crystal 4D (level1) without the diLitium extensions so it ticks the box for the federation approval process but is useless

      2. Anonymous Coward
        Anonymous Coward

        Re: Unfortunately

        That is problematic, but the biggest problem will be that the starship the aliens arrive in won't have a TPM chip.

        1. LybsterRoy Silver badge

          Re: Unfortunately

          That's alright Rufus can install without TPM

    2. xyz Silver badge

      Re: Unfortunately

      And the autoupdate is going to be a bitch.

    3. LybsterRoy Silver badge

      Re: Unfortunately

      The solution was obvious - I just installed Linux (ET phone home edition)

  3. Gene Cash Silver badge

    So they've probably got one device to read it?

    Yeah. So "eternity" is probably what... a year or so until that is repurposed or broken or forgotten?

    "This glass has interesting refraction patterns. It was probably used to for personal decoration or religious purposes"

    ("religious purposes" being "archaeologist" for "we don't f*cking know")

    1. Neil Barnes Silver badge

      Re: So they've probably got one device to read it?

      I envisage the actual 'keep in a safe place' crystal having most of its space filled with increasingly small 'how to read this' instructions, starting with something visible to the naked eye, before you finally get down to the data.

      1. Blue Shirt Guy

        Re: So they've probably got one device to read it?

        'how to read this' instructions...

        I wonder what language they'll use.

        https://m.youtube.com/watch?v=pwODwwgE6rA

        1. Neil Barnes Silver badge

          Re: So they've probably got one device to read it?

          Obviously, they'll be written in Ikean pictograms, so no-one will be able to decode them anyway.

        2. heyrick Silver badge
          Happy

          Re: So they've probably got one device to read it?

          Heh... I wonder if the French dub has it the other way around?

        3. Sceptic Tank Silver badge
          Big Brother

          Re: So they've probably got one device to read it?

          Probably German. Wasn't there that dude who did an experiment by putting a crowd of babies in a room unattended with the expectation that they would default to speaking German as they grew up?

          1. ThatOne Silver badge

            Re: So they've probably got one device to read it?

            Obligatory xkcd: https://xkcd.com/2567/

      2. Anonymous Coward
        Anonymous Coward

        Re: So they've probably got one device to read it?

        Hardly matters since it will just end up ground to dust with the rest of the salt and poured into a barrel of mutton flaps to preserve them.

      3. macsimski

        Re: So they've probably got one device to read it?

        "this page intentionally left blank"

    2. Anonymous Coward
      Anonymous Coward

      Re: So they've probably got one device to read it?

      How long until Chinese factories clone it for cheap? I want it as a key ring.

    3. Doctor Syntax Silver badge

      Re: So they've probably got one device to read it?

      ("religious purposes" being "archaeologist" for "we don't f*cking know")

      sreligous/ritual/

  4. Paul Crawford Silver badge

    Quaternary Park

    Come along, come along - watch and marvel at how these resurrected bipeds once ruled the Earth!

    See them make and fight with weapons - see why their rule ended!

    1. Anonymous Coward
      Anonymous Coward

      Re: Quaternary Park

      And step by our restaurants at the main court!

      1. The Oncoming Scorn Silver badge
        Pint

        Re: Quaternary Park

        I always try to walk right past them, in favor of an actual bar or restaurant.

        1. Ken G Silver badge

          Re: Quaternary Park

          The meat in those won't be actual cloned human through.

  5. John Brown (no body) Silver badge
    Alien

    Sending one out into space.

    We already sent a plaque on a probe telling the enemy fleet exactly where we are. How long before someone thinks it's a great idea to give the fleet out entire genetic code so they can tailor bio-weapons ready to soften us up[*] for the invasion?

    * or wipe us out in one fell swoop. Nothing like undercutting the other mercenary forces by making the invasion as low cost as possible :-)

    1. Anonymous Coward
      Anonymous Coward

      Re: Sending one out into space.

      Right on! Next up they'll be sending out the Cleveland Clinic's manual for how to create a successful zombie apocalypse!

    2. Timbo

      Re: Sending one out into space.

      "We already sent a plaque on a probe telling the enemy fleet exactly where we are."

      Well, there are TWO probes we launched into space - and on these plaques we told them where we were, "when" it was launched (and just gave our planets position withing the Solar System, plus a few markers out to various stars).

      But since then the Solar System has moved around the Milky Way a little bit and it will continue to do so, for many aeons to come, so any one (or thing) will need to do a lot of searching within the MW to find out where we are.

      And by then it might be too late anyways, if the human species hasn't either nuked itself (due to some depot with his/her finger on the trigger) or starved or warmed itself to extinction due to a lack of food and/or someone leaving that electric fire switched ON 24/7 :-)

      1. Anonymous Coward
        Anonymous Coward

        Re: Sending one out into space.

        Alien Wife: Well, we're lost again...nice going. You ruined the holiday.

        Alien: According to the map it should be here.

        Alien Wife: Yeah, 2 billion fucking years ago.

        Alien: Hey, I didn't want to come here, I just wanted a weekend away somewhere on our own planet. You insisted!

    3. Pascal Monett Silver badge

      Re: Sending one out into space.

      The enemy hardly needs biological weapons. A space-faring civilization capable of spanning the mind-boggling distances between stars will just chuck a 20km-wide asteroid at our planet and wait two (twenty ?) years for the fallout to wipe eveything out.

      Then they can colonize and mine our planet for whatever it is they think they're looking for, or just use the planet as another host for their ever-growing population.

  6. cornetman Silver badge
    Headmaster

    > force up to 10 tons per cm2

    Erm, is that not pressure?

    1. Anonymous Coward
      Anonymous Coward

      Yeah, it feels like 10,000 times the 1 kg per cm² that we experience at mean sea level I think.

  7. elsergiovolador Silver badge

    Bug

    When you fat fingered part of the genome and the aliens will get a knobhead.

    1. Anonymous Coward
      Anonymous Coward

      Re: Bug

      Or you spent so long making it perfectly circular, only to find out that alien disk loaders won't accept it because it has no corners.

      1. elsergiovolador Silver badge

        Re: Bug

        making it perfectly circular

        The idiom you are looking for is "cutting corners"

        1. theDeathOfRats
          Trollface

          Re: Bug

          Wait. Wasn't that Apple?

  8. vtcodger Silver badge

    One Question

    Exactly whose DNA did they sequence to make this thing?

    1. the spectacularly refined chap

      Re: One Question

      And who is that person going to mate with? We'll just end up with a Rimmerworld style population of identical clones.

      1. Anonymous Coward
        Anonymous Coward

        Re: One Question

        He's Arnold, Arnold, Arnold Rimmer...

    2. elsergiovolador Silver badge

      Re: One Question

      Rumour is they got the genome from the remains of famous Austrian aquarellist.

      1. Anonymous Coward
        Anonymous Coward

        Re: One Question

        Krieger!

    3. Jellied Eel Silver badge

      Re: One Question

      Exactly whose DNA did they sequence to make this thing?

      Ah, well-

      https://en.wikipedia.org/wiki/Human_Genome_Project#Genome_donors

      It was one of those FUN! projects where the UK did a lot of the work at the Sanger Centre in Cambridge. Then some additional FUN! when this happened-

      The statement sent Celera's stock plummeting and dragged down the biotechnology-heavy Nasdaq. The biotechnology sector lost about $50 billion in market capitalization in two days

      After Celera decided it was going to try and patent a lot of our sequences. Which the USPO seemed happy to comply with, even though there are several billion copies of prior art wandering around the planet. So the public labs published first and spoiled Celera's cunning plan to charge a licence fee every time people made copies of their 'work'. Which would then build on the work of Cleese, Chapman, Jones et al and prove that not only was every sperm sacred, but allowed for the collection of royalties.

      But the HGP is kind of an ensemble, and maybe more accurately described as the Human Chromosome Project given it mapped all the human chromsomes. Which also got into ethical stuff, like it needed to include both X and Y sets. Which would also be a challenge for future aliens who might try attempting to reconstruct a human from the chromsomal parts.

      But still a fascinating project and still delivering science, ie having a reference set of sequences, then a lot of ongoing work into sequencing more DNA and looking for genetic differences that might explain a whole slew of health conditions. Of which I'm proud to play a part in having donated DNA to explore if genes have an effect on diabetes.

      And it's also a neat example of UK science, ie the Southampton ORCs have been busily doing all sorts of interesting things in the optical field.

      1. Doctor Syntax Silver badge

        Re: One Question

        "still delivering science"

        No doubt an understatement. It will be delivering for years or, more likely, decades.

        1. Anonymous Coward
          Anonymous Coward

          Re: It will be delivering for years or, more likely, decades.

          so brexit will no longer be a lone deliverer!

      2. Dr. G. Freeman

        Re: One Question

        "the Southampton ORCs have been busily doing all sorts of interesting things in the optical field."

        Imagine what the Orcs could do if we gave them more dakka.

        1. Jellied Eel Silver badge

          Re: One Question

          Imagine what the Orcs could do if we gave them more dakka.

          They could probably speed up the data transfer with a spot of red paint.

      3. heyrick Silver badge

        Re: One Question

        "Which the USPO seemed happy to comply with"

        Those incompetent twats would probably allow one to patent respiration if it was described in lots of words with pretty diagrams.

      4. Anonymous Coward
        Anonymous Coward

        Re: One Question

        My word.

        Knowing my luck, had patents and royalties on spunk and DNA become a thing...I'd be that one unlucky bastard who gets fuck all because his spunk is only good enough to go in a vial attached to a tradeshow freebie keyring.

    4. lukewarmdog

      Re: One Question

      "For our First Human, we have brought back Time's Person of the Month, Donald Trump! Donald Trump, everyone, big hand.."

  9. Brave Coward Bronze badge

    Hope...

    ... there's a big red sticker on top of the box, reading:

    "For your own safety - Don't do this at home".

    1. elsergiovolador Silver badge

      Re: Hope...

      Who is sequencing genome at home?

      1. Ken Shabby Silver badge
        Devil

        Re: Hope...

        Well it’s a hollowed out volcano, and he he owns a fluffy white cat.

        1. Bebu
          Coat

          Re: Hope...

          Well it’s a hollowed out volcano, and he he owns a fluffy white cat.

          E.Ron Hubbard? (the volcano), Silas Greenback (white cat)? Ernst Stavro Blofeld? (the sane one.:)

      2. Yet Another Anonymous coward Silver badge

        Re: Hope...

        >Who is sequencing genome at home

        Sequencing - no

        Replicating - Oh Yea Baby

  10. Pascal Monett Silver badge

    "the Sun is expected to swallow our planet"

    The discussion is still open on that point. Maybe when the Sun goes into its red giant phase it will indeed swallow our planet, or maybe the Earth's orbit will have changed because the Sun's gravitational pull will have weakened.

    Either way, Humanity will have to have evacuated long before, or it will already be extinct and the fate of Planet Earth will no longer be a problem.

    1. HorseflySteve

      Re: "the Sun is expected to swallow our planet"

      "the fate of Planet Earth will no longer be a problem."

      To humanity, maybe, but all the other species might have something to say about it!

      Who knows what might have evolved to fill the niche we occupied once we've offed ourselves by whatever means.

      1. heyrick Silver badge

        Re: "the Sun is expected to swallow our planet"

        Cats that have evolved opposable thumbs.

    2. Ropewash

      Re: "the Sun is expected to swallow our planet"

      "will no longer be a problem."

      Not a problem for us, but for the thriving ten-billion year old cockroach population it will likely be insurmountable.

  11. Anonymous Coward
    Anonymous Coward

    I'm not a boffin but...

    ...would it not have been useful to put a metal ring around the crystal and embed a small radioactive isotope with a long half life to make it detectable through rubble and soil? Or are the boffins expecting a perfect mint condition museum exhibit to exist billions of years into the future where this crystal is sitting on a plinth?

    It seems we've found a way to store the data, but not make it discoverable by aliens sifting through the rubble and ruins of our planet, a tiny crystal will be incredibly difficult to find, even if the aliens have technology we can't imagine...boffins my arse.

    1. ThatOne Silver badge
      Facepalm

      Re: I'm not a boffin but...

      It's a vanity project, and as such its life span doesn't exceed the next fad. In time terms, at most a year.

      You didn't believe it might have some practical application, did you? A tiny little piece of glass, on which somebody has encoded the genome of some random person, using some mostly unknown encoding method. In 20-30 years even us humans won't know what that thingy is, assuming it isn't lost by then. Chances it will land in the recycling bin during a house cleaning well before that.

      1. Anonymous Coward
        Anonymous Coward

        Re: I'm not a boffin but...

        Isn't glass technically a fluid? Are they *really* sure those 20-nm sized features won't have moved in a billion years time? Wouldn't it better to have a massive, say 1m3, cube of glass and make the features a thousand times larger? It would be more impressive and harder to lose, too.

        I guess it doesn't matter though. Like you say, somebody has paid for it now, so its job is done.

        1. Anonymous Coward
          Anonymous Coward

          Re: I'm not a boffin but...

          Don't know about being liquid, but it will certainly shatter. Diamonds are the hardest material I know about, but if you hit one with a hammer it will be reduced to dust.

    2. Anonymous Coward
      Anonymous Coward

      Re: I'm not a boffin but...

      Comb the dessert!

  12. Anonymous Coward
    Anonymous Coward

    But who was the DNA taken from?

    They might be leaving aliens a blueprint to mass produce wankers.

    1. Gordon 10 Silver badge

      Re: But who was the DNA taken from?

      Since they'll be recreating a human that's a 100% certainty.

  13. Millwright
    FAIL

    Circular

    "The 5D memory crystals can also accommodate high-resolution graphics, so instructions for post-apocalypse re-industrialization, semiconductor competency, and optical engineering are available to those who might want to read the data but lack the necessary tools."

  14. Ball boy Silver badge

    Really, really hoping...

    ....that any future civilisation that has mastered the technology to recreate humans from this blueprint aren't so idiotic as to bother trying.

    If we've been wiped out, there was probably a good reason: either we can't survive the conditions the planet is in (so any reproduced 'human' would be confined to a strictly controlled lab environment) or we were too damn stupid in the first place.

    Won't stop a future generation Spielburg releasing a Jurassic World type film where rouge humans escape their enclosures and smash up wave-riders or whatever passes for 30th Century transport :-)

    1. Jason Bloomberg Silver badge
      Pint

      Re: Really, really hoping...

      where rouge humans escape their enclosures

      Is this insinuating the aliens will not be able to figure out what colour we are, like we can't be sure about the colour of dinosaurs, or should I be heading for the Grammar Nazi icon?

      1. Ball boy Silver badge

        Re: Really, really hoping...

        Ha. A pint for you, Sir.

        I'll write out 1,000 lines as penance immediately.

        for ($i=0; $i<=1000; $i++) { echo 'I will learn to spell before posting\n'; }

        There. 'tis done!

        1. Anonymous Coward
          Anonymous Coward

          Re: Really, really hoping...

          "I'll write out 1,000 lines as penance immediately.

          for ($i=0; $i<=1000; $i++) { echo 'I will learn to spell before posting\n'; }"

          That's 1001 lines, detention for you boy, my office after rugby, now get out of my site.

  15. Doctor Syntax Silver badge

    Pointless. Not the sequencing project but the fancy "archival" storage. Long-term survival of data is best served by multiple copies, particularly copies from one form of media to the next so that the storage technology remains current.

    1. Jellied Eel Silver badge

      Pointless. Not the sequencing project but the fancy "archival" storage.

      I don't think it is. But then it's basically a way to get media attention to otherwise fairly 'dull' storage advances. Which given our insatiable appetite for kitteh pics, can only be a good thing. Long term gets a bit more fun, but then also data stores that might be less prone to corruption in space. Plus it also gets people thinking. So storage density still isn't great, ie we can fit a greater amount of data in a smaller volume in, err.. DNA. Plus a sperm and an egg form a sorta self-replicating mechanism for reading & writing that data. Downside is storing that data would be harder.

      Or future archaelogists digging up what was Florida find elaborate arrays of memory crystals, often in the centre of places of worship. They find evidence of power going to these arrays, but can't figure out how the read/write processes worked, or extract data from these crystal arrays. So they may find a crystal like this one and bin it because they've found similar silicon-based devices marked with strange symbols like 80W and 100W, but couldn't recover data from those either.

      Which is a bit like some of the 'debate' around nuclear waste depositorys. People spend much time coming up with elaborate long-term warning symbols instead of just having people touch up the signs or replace them every few years. Which is like the graphics on this wafer, so how to indicate it contains something interesting. I guess they could be buried under big black monoliths though.

  16. Anonymous Coward
    Anonymous Coward

    Heart of glass...

    What? No Blondie snarkiness? El Reg readers may be slipping...

    1. heyrick Silver badge

      Re: Heart of glass...

      Given its a crystal, I had Heart of Stone by Kissin' Dynamite rumbling around my brain.

  17. O'Reg Inalsin

    Egoraving

    I bet there will be a rich market for having your DNA so engraved. And that there will be small recording mistakes that would make the regenerated human inviable.

  18. Fruit and Nutcase Silver badge
    Happy

    Sourdough

    Over in Belgium, there is this underground Sourdough library - may be the aliens can start baking bread,,,

    https://en.wikipedia.org/wiki/The_Puratos_Sourdough_Library

  19. Winkypop Silver badge
    Trollface

    CAUTION, YOUR NEW HUMAN IS NOT A TOY

    Proceeding past this point may involve:

    War

    Racism

    Hatred

    Religion

    Sexism

  20. CowHorseFrog Silver badge

    How exactly would future intelligence know what all those 1s and 0s actually mean ?

    1. Jellied Eel Silver badge

      How exactly would future intelligence know what all those 1s and 0s actually mean ?

      They'll give future xenoarchaeologists the chance to debate why we didn't use base4 in the first place.

      1. CowHorseFrog Silver badge

        But if you dont know this is DNA data, why would anyone guess base4 ?

  21. brainwrong

    Hey, I got one like that I found in a quarry....

    So what if we found a 300 million year old one of those created by a long lost intelligent species?

    What would we do with it? Re-create what would be to us an alien, along with some of their technology?

    Happy happy happy, Joy joy joy!

    Has anyone made that film yet? There's too much sci-fi now for me to attempt to follow any of it, so I honestly don't know.

  22. corestore

    Am I the only one thinking...

    "Demon With A Glass Hand"?

    1. demianph

      Re: Am I the only one thinking...

      First thing that came to my mind.

  23. Anonymous Coward
    Anonymous Coward

    a backup of humanity’s genetic code in case of a catastrophic event

    As an inherently inquisitive representative of the mainstream roach population I might, just might, consider paying to watch those funny 'humans' recreated after a catastrophi event, as they hop around their re-created cages in a local zoo. But then, isn't it a huge waste to spend state resources on such trifle pleasures?! I'm sure the other gentleroaches would agree that we face more pressing problems, like overroaching of our planet, never mind the clear and present danger from those underroaches across the sea who constantly try to infect and effectively poison our way of life! We need to focus on REAL roachproblems, and I strongly believe I have a solution to all of them!

    1. Winkypop Silver badge
      Mushroom

      Re: a backup of humanity’s genetic code in case of a catastrophic event

      We have always been at war with those under the Eastasia fridge.

  24. Gordon 10 Silver badge

    What's the instruction manual describing the equipment necessary to read this storage medium stored on?

    1. CowHorseFrog Silver badge

      There are many ancient languages we cant even read today. Maybe its me, but the shear volume of this DNA data is far greater than a few ancient tablets...

  25. User McUser
    Childcatcher

    Who's DNA is that?

    Great, but who's genetic duplicate will emerge from the cloning vat in 900Million years using this recorded DNA sequence?

    Did they include both XX and XY sequence variants so this newly resurrected human race can procreate?

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